Compile from source¶
Download the latest release of stack for your platform.
Older Linux distribution may still use
libgmp4, i.e, Centos 6.x.
If that is the case, you need to download the version compiled with
For example, something like “Linux 64-bit, libgmp4 for CentOS 6.x”.
Next, unpack the tarball and move
stack executable to a directory
that is in your
PATH environment variable, e.g.,
tar zxf stack-x.x.x-linux-x64.tar.gz mv stack-x.x.x-linux-x64/stack /usr/bin
Download Taiji source and install GHC¶
Download the latest source code and unpack it.
tar zxf Taiji-X.X.X.tar.gz
Go into the source code directory and install GHC.
cd Taiji-X.X.X stack setup
Once you have a working copy of GHC, you can proceed to install the dependencies (This will take a long time for the first time). Under the source code directory, type:
stack build --only-dependencies
and then install Taiji:
stack install --flag SciFlow:drmaa
If you want SGE integration. (This requires that the DRMAA C library is installed.)
After the installation, the
taiji executable should be in
Please add this directory to the
PATH environment variable (Do not know how to do this? See Linux Primer).